Crate fasten_straighten

Convert a fastq file to a standard 4-lines-per-entry format

Examples

cat weird.fastq | fasten_straighten > four-per-entry.fastq

Usage

Usage: fasten_straighten [-h] [-n INT] [-p] [-v]
 
Options:
    -h, --help          Print this help menu.
    -n, --numcpus INT   Number of CPUs (default: 1)
    -p, --paired-end    The input reads are interleaved paired-end
    -v, --verbose       Print more status messages

Functions

• main 🔒