Module bam::pileup [−][src]
Expand description
SAM/BAM files pileup: iterator over reference positions.
Contains three main structures:
- Pileup, which allows to iterate over pileup columns,
- Pileup column - contains information about all records that overlap a certain reference position,
- Pileup entry - a single record that overlaps a certain reference position.
Structs
Iterator over pileup columns, each column stores all records covering a single reference position.
Pileup column that stores all records that overlap a specific reference position.
Single record that covers a reference position. Part of a pileup column.
Enums
Type of the record sequence, matching a single reference position.