Struct bam::pileup::PileupColumn[−][src]

pub struct PileupColumn { /* fields omitted */ }

Expand description

Pileup column that stores all records that overlap a specific reference position.

Implementations

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impl PileupColumn

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pub fn entries(&self) -> &[PileupEntry ]

Returns pileup entries, corresponding to this reference position. The records have random order, so you may want to sort them.

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pub fn sort(&mut self)

Sort pileup entries by the start of the alignment, and then by the record names.

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pub fn ref_id(&self) -> u32

Returns 0-based reference id.

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pub fn ref_pos(&self) -> u32

Returns 0-based reference position.

Trait Implementations

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impl Clone for PileupColumn

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fn clone(&self) -> PileupColumn

Returns a copy of the value. Read more

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fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source. Read more

Auto Trait Implementations

impl !RefUnwindSafe for PileupColumn

impl !Send for PileupColumn

impl !Sync for PileupColumn

impl Unpin for PileupColumn

impl !UnwindSafe for PileupColumn

Blanket Implementations

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impl<T> Any for T where
T: 'static + ?Sized,

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pub fn type_id(&self) -> TypeId

Gets the TypeId of self. Read more

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impl<T> Borrow<T> for T where
T: ?Sized,

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pub fn borrow(&self) -> &T

Immutably borrows from an owned value. Read more

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impl<T> BorrowMut<T> for T where
T: ?Sized,

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pub fn borrow_mut(&mut self) -> &mut T

Mutably borrows from an owned value. Read more

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impl<T> From<T> for T

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pub fn from(t: T) -> T

Performs the conversion.

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impl<T, U> Into for T where
U: From<T>,

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pub fn into(self) -> U

Performs the conversion.

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impl<T> ToOwned for T where
T: Clone,

type Owned = T

The resulting type after obtaining ownership.

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pub fn to_owned(&self) -> T

Creates owned data from borrowed data, usually by cloning. Read more

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pub fn clone_into(&self, target: &mut T)

🔬 This is a nightly-only experimental API. (toowned_clone_into)

Uses borrowed data to replace owned data, usually by cloning. Read more

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impl<T, U> TryFrom for T where
U: Into<T>,

type Error = Infallible

The type returned in the event of a conversion error.

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pub fn try_from(value: U) -> Result<T, <T as TryFrom>::Error>

Performs the conversion.

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impl<T, U> TryInto for T where
U: TryFrom<T>,

type Error = >::Error

The type returned in the event of a conversion error.

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pub fn try_into(self) -> Result<U, >::Error>

Performs the conversion.

Struct bam::pileup::PileupColumn[−][src]

Implementations

impl PileupColumn

pub fn entries(&self) -> &[PileupEntry ]

pub fn sort(&mut self)

pub fn ref_id(&self) -> u32

pub fn ref_pos(&self) -> u32

Trait Implementations

impl Clone for PileupColumn

fn clone(&self) -> PileupColumn

fn clone_from(&mut self, source: &Self)

Auto Trait Implementations

impl !RefUnwindSafe for PileupColumn

impl !Send for PileupColumn

impl !Sync for PileupColumn

impl Unpin for PileupColumn

impl !UnwindSafe for PileupColumn

Blanket Implementations

impl<T> Any for T where
T: 'static + ?Sized,

pub fn type_id(&self) -> TypeId

impl<T> Borrow<T> for T where
T: ?Sized,

pub fn borrow(&self) -> &T

impl<T> BorrowMut<T> for T where
T: ?Sized,

pub fn borrow_mut(&mut self) -> &mut T

impl<T> From<T> for T

pub fn from(t: T) -> T

impl<T, U> Into<U> for T where
U: From<T>,

pub fn into(self) -> U

impl<T> ToOwned for T where
T: Clone,

type Owned = T

pub fn to_owned(&self) -> T

pub fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for T where
U: Into<T>,

type Error = Infallible

pub fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for T where
U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

pub fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

Struct bam::pileup::PileupColumn[−][src]

Implementations

impl PileupColumn

pub fn entries(&self) -> &[PileupEntry]

pub fn sort(&mut self)

pub fn ref_id(&self) -> u32

pub fn ref_pos(&self) -> u32

Trait Implementations

impl Clone for PileupColumn

fn clone(&self) -> PileupColumn

fn clone_from(&mut self, source: &Self)

Auto Trait Implementations

impl !RefUnwindSafe for PileupColumn

impl !Send for PileupColumn

impl !Sync for PileupColumn

impl Unpin for PileupColumn

impl !UnwindSafe for PileupColumn

Blanket Implementations

impl<T> Any for T where T: 'static + ?Sized,

pub fn type_id(&self) -> TypeId

impl<T> Borrow<T> for T where T: ?Sized,

pub fn borrow(&self) -> &T

impl<T> BorrowMut<T> for T where T: ?Sized,

pub fn borrow_mut(&mut self) -> &mut T

impl<T> From<T> for T

pub fn from(t: T) -> T

impl<T, U> Into<U> for T where U: From<T>,

pub fn into(self) -> U

impl<T> ToOwned for T where T: Clone,

type Owned = T

pub fn to_owned(&self) -> T

pub fn clone_into(&self, target: &mut T)

impl<T, U> TryFrom<U> for T where U: Into<T>,

type Error = Infallible

pub fn try_from(value: U) -> Result<T, <T as TryFrom<U>>::Error>

impl<T, U> TryInto<U> for T where U: TryFrom<T>,

type Error = <U as TryFrom<T>>::Error

pub fn try_into(self) -> Result<U, <U as TryFrom<T>>::Error>

pub fn entries(&self) -> &[PileupEntry ]

impl<T> Any for T where
T: 'static + ?Sized,

impl<T> Borrow<T> for T where
T: ?Sized,

impl<T> BorrowMut<T> for T where
T: ?Sized,

impl<T, U> Into<U> for T where
U: From<T>,

impl<T> ToOwned for T where
T: Clone,

impl<T, U> TryFrom<U> for T where
U: Into<T>,

impl<T, U> TryInto<U> for T where
U: TryFrom<T>,