Blog posts
A few blog posts that I’ve really liked for my niche of public health and bioinformatics. I think one purpose of this blog can be to start gathering these posts and publications. Maybe I should also start gathering tweets?
- Ultrafast SNP Analysis using the Burrows-Wheeler Transform of Short-read Data
- E. coli Genome Assembled using Nanopore Data Only
- Behind the paper: SRST2 for short read sequence typing of bacterial pathogens
- Bacterial genomics tutorial
- Not so fast, FastTree
- Adding command line options to your shell scripts